BGC0001195: nocardiopsin A biosynthetic gene cluster from Nocardiopsis sp. CMB-M0232
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 3,538 - 80,239 nt. (total: 76,702 nt).
This entry is originally from NCBI GenBank KP339942.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001195
Short description nocardiopsin A biosynthetic gene cluster from Nocardiopsis sp. CMB-M0232
Status Minimal annotation: yes
A minimal annotation only contains information on the BGC loci and one or more linked chemical product(s)

Completeness: Unknown
Whether the loci encodes everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRP
  • Polyketide
Loci NCBI GenBank: KP339942.1
Compounds
  • nocardiopsin A
  • nocardiopsin B
  • nocardiopsin C
  • nocardiopsin D
Species Nocardiopsis sp. CMB-M0232 [taxonomy]
References
Chemical products information
nocardiopsin A
Copy SMILES
C33H51N1O7
Chemical database entries
PubCHEM
nocardiopsin B
Copy SMILES
C33H53N1O7
Chemical database entries
PubCHEM
nocardiopsin C
Copy SMILES
C32H49N1O7
Chemical database entries
PubCHEM
nocardiopsin D
Copy SMILES
C32H51N1O7
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AJW65397.1
3538 - 4254 (-) AraC regulator
copy AA seq
copy Nt seq
  • AJW65398.1
4518 - 5114 (+) transcription regulator
copy AA seq
copy Nt seq
  • AJW65399.1
5477 - 6226 (+) oxidoreductase
copy AA seq
copy Nt seq
  • AJW65400.1
6472 - 7716 (-) cytochrome P450 monooxygenase
copy AA seq
copy Nt seq
  • AJW65401.1
8232 - 8873 (-) transport protein
copy AA seq
copy Nt seq
  • AJW65402.1
8870 - 9322 (-) transport protein
copy AA seq
copy Nt seq
  • AJW65403.1
9705 - 12326 (+) ATPase
copy AA seq
copy Nt seq
  • AJW65404.1
12499 - 13578 (-) cytochrome P450 epoxidase
copy AA seq
copy Nt seq
  • AJW65405.1
14040 - 15077 (+) lysine cyclodeaminase
copy AA seq
copy Nt seq
  • AJW65406.1
15207 - 19841 (+) nonribosomal peptide synthetase
copy AA seq
copy Nt seq
  • AJW65407.1
19885 - 39114 (+) type I modular polyketide synthase
copy AA seq
copy Nt seq
  • AJW65408.1
39249 - 54749 (+) type I modular polyketide synthase
copy AA seq
copy Nt seq
  • AJW65409.1
54742 - 69555 (+) type I modular polyketide synthase
copy AA seq
copy Nt seq
  • AJW65410.1
69604 - 75009 (+) type I modular polyketide synthase
copy AA seq
copy Nt seq
  • AJW65411.1
75088 - 75525 (-) epoxide hydrolase
copy AA seq
copy Nt seq
  • AJW65412.1
75947 - 76639 (+) LuxR transcription regulator
copy AA seq
copy Nt seq
  • AJW65413.1
76830 - 77753 (-) 2Fe-2S-binding protein
copy AA seq
copy Nt seq
  • AJW65414.1
78143 - 79438 (+) glycosyltransferase
copy AA seq
copy Nt seq
  • AJW65415.1
79838 - 80239 (+) XRE family transcription regulator
copy AA seq
copy Nt seq
Annotation changelog
MIBiG version Submitter Notes
1.1
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Submitted
2.0
  • Hidden contributor (ID: AAAAAAAAAAAAAAAAAAAAAAAA, no GDPR consent given).
  • Migrated from v1.4
  • Updated compound(s) information (MIBiG Annotathon)
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.