BGC0001457: jomthonic acid A biosynthetic gene cluster from Streptomyces caniferus
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 1 - 54,671 nt. (total: 54,671 nt).
This entry is originally from NCBI GenBank LT990689.1, but has been modified (see Modifications tab for details).

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
NRPS/PKS domains
Modifications
General information about the BGC
MIBiG accession BGC0001457
Short description jomthonic acid A biosynthetic gene cluster from Streptomyces caniferus
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • NRPS (Type I)
Loci
LT990689.1
via
Compounds
  • jomthonic acid A
  • jomthonic acid B
  • jomthonic acid C
Species Streptomyces caniferus [taxonomy]
References
Chemical products information
jomthonic acid A Evidence:
Copy SMILES
C22H29N1O5
Chemical database entries
NPAtlas
jomthonic acid B Evidence:
Copy SMILES
C21H27N1O5
Chemical database entries
PubCHEM
jomthonic acid C Evidence:
Copy SMILES
C21H27N1O5
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ctg1_orf1
1 - 585 (+)
    copy AA seq
    copy Nt seq
    • ctg1_orf2
    589 - 1530 (+)
      copy AA seq
      copy Nt seq
      • ctg1_orf3
      1782 - 6170 (+)
        copy AA seq
        copy Nt seq
        • ctg1_orf4
        6284 - 10861 (+)
          copy AA seq
          copy Nt seq
          • ctg1_orf5
          10872 - 11597 (+)
            copy AA seq
            copy Nt seq
            • ctg1_orf6
            11629 - 11943 (+)
              copy AA seq
              copy Nt seq
              • ctg1_orf7
              12016 - 12315 (+)
                copy AA seq
                copy Nt seq
                • ctg1_orf8
                12534 - 13403 (+)
                  copy AA seq
                  copy Nt seq
                  • ctg1_orf9
                  13633 - 14859 (+)
                    copy AA seq
                    copy Nt seq
                    • ctg1_orf10
                    15266 - 16168 (+)
                      copy AA seq
                      copy Nt seq
                      • ctg1_orf11
                      16391 - 16678 (+)
                        copy AA seq
                        copy Nt seq
                        • ctg1_orf12
                        16794 - 17654 (+)
                          copy AA seq
                          copy Nt seq
                          • ctg1_orf13
                          17770 - 18426 (+)
                            copy AA seq
                            copy Nt seq
                            • ctg1_orf14
                            18540 - 18857 (+)
                              copy AA seq
                              copy Nt seq
                              • ctg1_orf15
                              19900 - 26181 (+)
                                copy AA seq
                                copy Nt seq
                                • ctg1_orf16
                                26178 - 31739 (+)
                                  copy AA seq
                                  copy Nt seq
                                  • ctg1_orf17
                                  31736 - 34924 (+)
                                    copy AA seq
                                    copy Nt seq
                                    • ctg1_orf18
                                    35011 - 35775 (+)
                                      copy AA seq
                                      copy Nt seq
                                      • ctg1_orf19
                                      35828 - 36046 (+)
                                        copy AA seq
                                        copy Nt seq
                                        • ctg1_orf20
                                        36043 - 37032 (+)
                                          copy AA seq
                                          copy Nt seq
                                          • ctg1_orf21
                                          37367 - 39703 (+)
                                            copy AA seq
                                            copy Nt seq
                                            • ctg1_orf22
                                            40122 - 40850 (+)
                                              copy AA seq
                                              copy Nt seq
                                              • ctg1_orf23
                                              40912 - 42126 (+)
                                                copy AA seq
                                                copy Nt seq
                                                • ctg1_orf24
                                                42359 - 43324 (+)
                                                  copy AA seq
                                                  copy Nt seq
                                                  • ctg1_orf25
                                                  43355 - 43804 (+)
                                                    copy AA seq
                                                    copy Nt seq
                                                    • ctg1_orf26
                                                    43900 - 44271 (+)
                                                      copy AA seq
                                                      copy Nt seq
                                                      • ctg1_orf27
                                                      44275 - 45231 (+)
                                                        copy AA seq
                                                        copy Nt seq
                                                        • ctg1_orf28
                                                        45279 - 45851 (+)
                                                          copy AA seq
                                                          copy Nt seq
                                                          • ctg1_orf29
                                                          45848 - 46969 (+)
                                                            copy AA seq
                                                            copy Nt seq
                                                            • ctg1_orf30
                                                            47199 - 48008 (+)
                                                              copy AA seq
                                                              copy Nt seq
                                                              • ctg1_orf31
                                                              48005 - 49075 (+)
                                                                copy AA seq
                                                                copy Nt seq
                                                                • ctg1_orf32
                                                                49072 - 50085 (+)
                                                                  copy AA seq
                                                                  copy Nt seq
                                                                  • ctg1_orf33
                                                                  50268 - 51269 (+)
                                                                    copy AA seq
                                                                    copy Nt seq
                                                                    • ctg1_orf34
                                                                    51484 - 52260 (+)
                                                                      copy AA seq
                                                                      copy Nt seq
                                                                      • ctg1_orf35
                                                                      52517 - 52897 (+)
                                                                        copy AA seq
                                                                        copy Nt seq
                                                                        • ctg1_orf36
                                                                        52958 - 53785 (+)
                                                                          copy AA seq
                                                                          copy Nt seq
                                                                          • ctg1_orf37
                                                                          54012 - 54671 (+)
                                                                            copy AA seq
                                                                            copy Nt seq
                                                                            Biosynthesis information

                                                                            No biosynthesis information available for this record.

                                                                            Annotation changelog

                                                                            Entry version: 3

                                                                            Date
                                                                            Changes
                                                                            Submitters
                                                                            Reviewers
                                                                            Removed empty gene annotations
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                            Entry version: 2

                                                                            Date
                                                                            Changes
                                                                            Submitters
                                                                            Reviewers
                                                                            Migrated from v1.4
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            Updated reference publication(s) (MIBiG Annotathon)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            Updated compound(s) information (NPAtlas curation)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                            Entry version: 1

                                                                            Date
                                                                            Changes
                                                                            Submitters
                                                                            Reviewers
                                                                            Submitted
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                            Similar known clusters from MIBiG 4.0
                                                                            Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                                                            Detailed help and explanations are available here.

                                                                            Click on reference genes to show details of similarities to genes within the current region.
                                                                            Double click on a reference drawing to reverse the display of the genes.

                                                                            Click on an accession to open that entry in the MIBiG database.


                                                                            Location:

                                                                            Identifier
                                                                            Identity
                                                                            Coverage
                                                                            Detailed domain annotation
                                                                            Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
                                                                            A domain glossary is available here, and an explanation of the visualisation is available here.
                                                                            Selected features only
                                                                            Show module domains
                                                                            Modifications to original record
                                                                            • ctg1_orf1 was added
                                                                            • ctg1_orf2 was added
                                                                            • ctg1_orf3 was added
                                                                            • ctg1_orf4 was added
                                                                            • ctg1_orf5 was added
                                                                            • ctg1_orf6 was added
                                                                            • ctg1_orf7 was added
                                                                            • ctg1_orf8 was added
                                                                            • ctg1_orf9 was added
                                                                            • ctg1_orf10 was added
                                                                            • ctg1_orf11 was added
                                                                            • ctg1_orf12 was added
                                                                            • ctg1_orf13 was added
                                                                            • ctg1_orf14 was added
                                                                            • ctg1_orf15 was added
                                                                            • ctg1_orf16 was added
                                                                            • ctg1_orf17 was added
                                                                            • ctg1_orf18 was added
                                                                            • ctg1_orf19 was added
                                                                            • ctg1_orf20 was added
                                                                            • ctg1_orf21 was added
                                                                            • ctg1_orf22 was added
                                                                            • ctg1_orf23 was added
                                                                            • ctg1_orf24 was added
                                                                            • ctg1_orf25 was added
                                                                            • ctg1_orf26 was added
                                                                            • ctg1_orf27 was added
                                                                            • ctg1_orf28 was added
                                                                            • ctg1_orf29 was added
                                                                            • ctg1_orf30 was added
                                                                            • ctg1_orf31 was added
                                                                            • ctg1_orf32 was added
                                                                            • ctg1_orf33 was added
                                                                            • ctg1_orf34 was added
                                                                            • ctg1_orf35 was added
                                                                            • ctg1_orf36 was added
                                                                            • ctg1_orf37 was added