BGC0001492: abyssomicin M biosynthetic gene cluster from Streptomyces sp. LC-6-2
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Location: 1 - 70,308 nt. (total: 70,308 nt).
This entry is originally from NCBI GenBank KY432814.1.

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
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Gene details
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General
Compounds
Genes
Biosynthesis
History
NRPS/PKS domains
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001492
Short description abyssomicin M biosynthetic gene cluster from Streptomyces sp. LC-6-2
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • PKS (Unknown)
Loci
KY432814.1
via
Compounds
  • abyssomicin M
  • abyssomicin N
  • abyssomicin O
  • abyssomicin P
  • abyssomicin Q
  • abyssomicin R
  • abyssomicin S
  • abyssomicin T
  • abyssomicin U
  • abyssomicin V
  • abyssomicin W
  • abyssomicin X
Species Streptomyces sp. LC-6-2 [taxonomy]
References
Chemical products information
abyssomicin M Evidence:
(no structure information available)
abyssomicin N Evidence:
(no structure information available)
abyssomicin O Evidence:
(no structure information available)
abyssomicin P Evidence:
(no structure information available)
abyssomicin Q Evidence:
(no structure information available)
abyssomicin R Evidence:
(no structure information available)
abyssomicin S Evidence:
(no structure information available)
abyssomicin T Evidence:
(no structure information available)
abyssomicin U Evidence:
(no structure information available)
abyssomicin V Evidence:
(no structure information available)
abyssomicin W Evidence:
Copy SMILES
C20H26O8
Chemical database entries
PubCHEM
abyssomicin X Evidence:
Copy SMILES
C20H24O7
Chemical database entries
PubCHEM
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • ARE67866.1
 1 - 4107 (-) type IV secretion protein Rhs
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    • ARE67864.1
    		 5235 - 5798 (-) AbsM
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      • ARE67863.1
      		 6121 - 7026 (-) AbsP
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        • ARE67862.1
        		 7401 - 8030 (-) AbsK
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          • ARE67861.1
          		 8294 - 9007 (-) AbC1
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            • ARE67860.1
            		 9077 - 10240 (+) AbsH3
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              • ARE67859.1
              		 10452 - 10805 (+) AbsH2
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                • ARE67858.1
                		 10908 - 11465 (-) AbsH1
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                  • ARE67857.1
                  		 11642 - 12697 (+) AbsA1
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                    • ARE67856.1
                    		 12699 - 12932 (+) AbsA3
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                      • ARE67855.1
                      		 12929 - 13684 (+) AbsA4
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                        • ARE67854.1
                        		 13681 - 14826 (+) AbsA5
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                          • ARE67865.1
                          		 14823 - 15650 (+) AbsN
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                            • ARE67853.1
                            		 15898 - 35172 (+) AbsB1
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                              • ARE67852.1
                              		 35355 - 46289 (+) AbsB2
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                                • ARE67851.1
                                		 46315 - 49464 (+) AbsB3
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                                  • ARE67850.1
                                  		 49461 - 51410 (+) AbsA2
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                                    • ARE67849.1
                                    		 51509 - 52495 (+) AbsE
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                                      • ARE67848.1
                                      		 52796 - 54460 (+) AbsF1
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                                        • ARE67847.1
                                        		 54445 - 55446 (+) AbsF2
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                                          • ARE67846.1
                                          		 55443 - 56252 (+) AbsF3
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                                            • ARE67845.1
                                            		 56249 - 57916 (+) AbsF4
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                                              • ARE67844.1
                                              		 58988 - 60181 (+) AbsV
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                                                • ARE67843.1
                                                		 60187 - 60393 (+) AbsG1
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                                                  • ARE67842.1
                                                  		 60425 - 61588 (+) AbsI
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                                                    • ARE67841.1
                                                    		 61650 - 62861 (+) AbsX
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                                                      • ARE67840.1
                                                      		 62876 - 63070 (+) AbsG2
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                                                        • ARE67839.1
                                                        		 63170 - 64204 (-) AbsJ
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                                                          • ARE67838.1
                                                          		 64213 - 64728 (-) AbsU
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                                                            • ARE67837.1
                                                            		 64965 - 65555 (-) AbsC2
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                                                              • ARE67836.1
                                                              		 65766 - 67196 (+) AbsD
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                                                                • ARE67835.1
                                                                		 67471 - 70308 (+) transcription regulator
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                                                                  Biosynthesis information
                                                                  Annotation changelog

                                                                  Entry version: 4

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  2022-10-07
                                                                  Update chemical activity to schema version 2.11
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 3

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  2022-09-15
                                                                  Updated bioactivity data
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 2

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  2019-10-16
                                                                  Migrated from v1.4
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  2019-10-16
                                                                  Updated compound(s) information (NPAtlas curation)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                                                  Entry version: 1

                                                                  Date
                                                                  Changes
                                                                  Submitters
                                                                  Reviewers
                                                                  2018-08-06
                                                                  Submitted
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                                                  Detailed domain annotation
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