BGC0001498: aerobactin biosynthetic gene cluster from Xenorhabdus szentirmaii DSM 16338
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 7,055 - 39,575 nt. (total: 32,521 nt).
This entry is originally from NCBI GenBank CBXF010000089.1.

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
General information about the BGC
MIBiG accession BGC0001498
Short description aerobactin biosynthetic gene cluster from Xenorhabdus szentirmaii DSM 16338
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
CBXF010000089.1
16055 - 30575
via
Compounds
  • aerobactin
Species Xenorhabdus szentirmaii DSM 16338 [taxonomy]
References
Chemical products information
aerobactin Evidence:
Copy SMILES
C22H36N4O13
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XSR1_300017
  • CDL83399.1
  • trkG
15954 - 17414 (+) Trk system potassium uptake protein trkG
    copy AA seq
    copy Nt seq
    • XSR1_300018
    • CDL83400.1
    • iutA
    17497 - 19716 (-) Ferric aerobactin receptor
      copy AA seq
      copy Nt seq
      • XSR1_300019
      • CDL83401.1
      • iucD
      19754 - 21058 (-) L-lysine 6-monooxygenase
        copy AA seq
        copy Nt seq
        • XSR1_300020
        • CDL83402.1
        • iucC
        21055 - 22818 (-) Aerobactin siderophore biosynthesis protein iucC
          copy AA seq
          copy Nt seq
          • XSR1_300021
          • CDL83404.1
          • iucB
          22815 - 23816 (-) Aerobactin siderophore biosynthesis protein iucB
            copy AA seq
            copy Nt seq
            • XSR1_300022
            • CDL83405.1
            • iucA
            23803 - 25575 (-) Aerobactin siderophore biosynthesis protein iucA
              copy AA seq
              copy Nt seq
              • XSR1_300023
              • CDL83406.1
              25704 - 26918 (+) conserved membrane hypothetical protein
                copy AA seq
                copy Nt seq
                • XSR1_300024
                • CDL83407.1
                26938 - 27876 (+) FAD-binding 9 siderophore-interacting domain-containing protein
                  copy AA seq
                  copy Nt seq
                  • XSR1_300025
                  • CDL83408.1
                  • fhuC
                  27879 - 28676 (+) Iron(3+)-hydroxamate import ATP-binding protein FhuC
                    copy AA seq
                    copy Nt seq
                    • XSR1_300026
                    • CDL83409.1
                    • fhuD
                    28676 - 29587 (+) Iron(3+)-hydroxamate-binding protein fhuD
                      copy AA seq
                      copy Nt seq
                      • XSR1_300027
                      • CDL83411.1
                      • fhuB
                      29584 - 31557 (+) Iron(3+)-hydroxamate import system permease protein fhuB
                        copy AA seq
                        copy Nt seq
                        Biosynthesis information

                        No biosynthesis information available for this record.

                        Annotation changelog

                        Entry version: 4

                        Date
                        Changes
                        Submitters
                        Reviewers
                        Update chemical activity to schema version 2.11
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                        Entry version: 3

                        Date
                        Changes
                        Submitters
                        Reviewers
                        Updated bioactivity data
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                        Entry version: 2

                        Date
                        Changes
                        Submitters
                        Reviewers
                        Migrated from v1.4
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                        Entry version: 1

                        Date
                        Changes
                        Submitters
                        Reviewers
                        Submitted
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                        • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                        Similar known clusters from MIBiG 4.0
                        Shows clusters from the MIBiG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                        Detailed help and explanations are available here.

                        Click on reference genes to show details of similarities to genes within the current region.
                        Double click on a reference drawing to reverse the display of the genes.

                        Click on an accession to open that entry in the MIBiG database.


                        Location:

                        Identifier
                        Identity
                        Coverage