BGC0001756: retigeranin biosynthetic gene cluster from Arabidopsis thaliana
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Location: 4,863,613 - 4,887,487 nt. (total: 23,875 nt).
This entry is originally from NCBI GenBank CP002686.1, but has been modified (see Modifications tab for details).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0001756
Short description retigeranin biosynthetic gene cluster from Arabidopsis thaliana
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • terpene (Unknown)
Loci
CP002686.1
4863613 - 4887487
via
Compounds
  • retigeranin
  • arathanatriene
Species Arabidopsis thaliana [taxonomy]
References
Chemical products information
retigeranin Evidence:
(no structure information available)
arathanatriene Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • AT3G14490
  • AEE75532.1
 4863631 - 4865949 (-) Terpenoid cyclases/Protein prenyltransferases superfamily protein
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    • AT3G14510
    • AEE75533.1
    		 4867378 - 4868305 (-) Polyprenyl synthetase family protein
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      • AT3G14520
      • AEE75534.1
      		 4875868 - 4878243 (-) Terpenoid cyclases/Protein prenyltransferases superfamily protein
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        • AT3G14530
        • AEE75535.1
        		 4879293 - 4880448 (-) Terpenoid synthases superfamily protein
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          • AT3G14540
          • AEE75536.1
          		 4881614 - 4883936 (-) Terpenoid cyclases/Protein prenyltransferases superfamily protein
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            • AT3G14540_rename1
            • ANM63377.1
            		 4881987 - 4883936 (-) Terpenoid cyclases/Protein prenyltransferases superfamily protein
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              • AT3G14550
              • ANM64718.1
              • GGPS3
              		 4884754 - 4885945 (-) geranylgeranyl pyrophosphate synthase 3
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                Biosynthesis information
                Annotation changelog

                Entry version: 2

                Date
                Changes
                Submitters
                Reviewers
                2019-10-16
                Migrated from v1.4
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                Entry version: 1

                Date
                Changes
                Submitters
                Reviewers
                2018-08-06
                Submitted
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                Similar known gene clusters from MIBiG 4.0
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                Modifications to original record
                • renamed CDS with name AT3G14540 at join{[4883690:4883936](-), [4883333:4883604](-), [4882849:4883234](-), [4882555:4882774](-), [4882337:4882476](-), [4881986:4882253](-)} to AT3G14540_rename1 to avoid duplicates
                • removed an exact duplicate of CDS feature AT3G14550
                • removed an exact duplicate of CDS feature AT3G14550