BGC0002008: aryl polyenes biosynthetic gene cluster from Xenorhabdus doucetiae
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Location: 3,655,966 - 3,671,216 nt. (total: 15,251 nt).
This entry is originally from NCBI GenBank NZ_FO704550.1, but has been modified (see Modifications tab for details).

Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset zoomreset view
zoomzoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0002008
Short description aryl polyenes biosynthetic gene cluster from Xenorhabdus doucetiae
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
Loci
NZ_FO704550.1
3655966 - 3671216
via
Compounds
  • aryl polyenes
Species Xenorhabdus doucetiae [taxonomy]
References
Chemical products information
aryl polyenes Evidence:
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XDD1_RS15980
  • WP_045972701.1
3655966 - 3656355 (+) hypothetical protein
    copy AA seq
    copy Nt seq
    • XDD1_RS15985
    • WP_045972703.1
    3656468 - 3657541 (+) class I SAM-dependent methyltransferase
      copy AA seq
      copy Nt seq
      • XDD1_RS15990
      • WP_045972706.1
      3657555 - 3658274 (+) beta-ketoacyl synthase chain length factor
        copy AA seq
        copy Nt seq
        • XDD1_RS15995
        • WP_045972707.1
        3658276 - 3659067 (+) 1-acyl-sn-glycerol-3-phosphate acyltransferase
          copy AA seq
          copy Nt seq
          • XDD1_RS16000
          • WP_045972709.1
          3659086 - 3659343 (+) phosphopantetheine-binding protein
            copy AA seq
            copy Nt seq
            • XDD1_RS16005
            • WP_045972712.1
            3659355 - 3659606 (+) acyl carrier protein
              copy AA seq
              copy Nt seq
              • XDD1_RS16010
              • WP_045972714.1
              3659656 - 3660219 (+) hypothetical protein
                copy AA seq
                copy Nt seq
                • XDD1_RS16015
                • WP_052705732.1
                3660216 - 3661601 (+) AMP-binding protein
                  copy AA seq
                  copy Nt seq
                  • XDD1_RS16020
                  • WP_045972718.1
                  3661588 - 3661947 (+) hydroxymyristoyl-ACP dehydratase
                    copy AA seq
                    copy Nt seq
                    • XDD1_RS16025
                    • WP_045972720.1
                    3661938 - 3663653 (+) glycosyltransferase family 2 protein
                      copy AA seq
                      copy Nt seq
                      • XDD1_RS16030
                      • WP_045972722.1
                      3663658 - 3664080 (+) thioesterase family protein
                        copy AA seq
                        copy Nt seq
                        • XDD1_RS16035
                        • WP_045973732.1
                        3664098 - 3664700 (+) outer membrane lipoprotein carrier protein LolA
                          copy AA seq
                          copy Nt seq
                          • XDD1_RS16040
                          • WP_045972724.1
                          3664672 - 3666996 (+) MMPL family transporter
                            copy AA seq
                            copy Nt seq
                            • XDD1_RS16045
                            • WP_045972727.1
                            3666993 - 3667556 (+) DUF3261 domain-containing protein
                              copy AA seq
                              copy Nt seq
                              • XDD1_RS16050
                              • WP_045972729.1
                              3667560 - 3668735 (+) beta-ketoacyl-[acyl-carrier-protein] synthase family protein
                                copy AA seq
                                copy Nt seq
                                • XDD1_RS16055
                                • WP_148886113.1
                                3668735 - 3669232 (+) hotdog family protein
                                  copy AA seq
                                  copy Nt seq
                                  • XDD1_RS16060
                                  • WP_045972731.1
                                  3669229 - 3669960 (+) 3-ketoacyl-ACP reductase FabG2
                                    copy AA seq
                                    copy Nt seq
                                    • XDD1_RS16065
                                    • WP_045972733.1
                                    3669957 - 3671216 (+) beta-ketoacyl-ACP synthase
                                      copy AA seq
                                      copy Nt seq
                                      Biosynthesis information
                                      Annotation changelog

                                      Entry version: 2

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      Added AMP-binding domain substrate specificities
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                      Entry version: 1

                                      Date
                                      Changes
                                      Submitters
                                      Reviewers
                                      Submitted
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                      Similar known gene clusters from MIBiG 4.0
                                      Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
                                      Click on reference genes to show details of similarities to genes within the current region.
                                      Click on an accession to open that entry in the MiBIG database.
                                      Modifications to original record
                                      • XDD1_RS00070 crossed the origin and was split into two features