BGC0002722: α-chaconine biosynthetic gene cluster from Solanum tuberosum
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Location: 1,123,005 - 1,460,949 nt. (total: 337,945 nt).
This entry is originally from NCBI GenBank GPS_003181711.1, but has been modified (see Modifications tab for details).

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core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
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General
Compounds
Genes
Biosynthesis
History
KnownClusterBlast
Modifications
General information about the BGC
MIBiG accession BGC0002722
Short description α-chaconine biosynthetic gene cluster from Solanum tuberosum
Status Quality: questionable
The quality level of this entry.

Status: active
The status of this entry.

Completeness: unknown
Whether the entry covers everything needed for the pathway producing the compound(s)
Biosynthetic class(es)
  • other (other)
  • terpene (Unknown)
  • saccharide (None)
Loci
GPS_003181711.1
1123005 - 1460949
via Heterologous expression, Gene expression correlated with compound production
Compounds
  • α-chaconine
  • α-solanine
Species Solanum tuberosum [taxonomy]
References
Chemical products information
α-chaconine Evidence: NMR [1]
(no structure information available)
α-solanine Evidence: NMR [1]
(no structure information available)
List of genes involved in compound(s) production
Identifiers Position Product Functions Evidence Extra
  • XP_006351990.1
  • LOC102598519_rename1
 1123008 - 1129828 (+) auxin response factor 6-like isoform X2
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    • XP_006351989.1
    • LOC102598519
    		 1123008 - 1129828 (+) auxin response factor 6-like isoform X1
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      • XP_006352054.1
      • LOC102594239
      		 1131386 - 1135229 (+) protein DETOXIFICATION 41
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        • XP_006351988.1
        • LOC102598184
        		 1135912 - 1141513 (-) probable polyamine oxidase 2
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          • XP_006351987.1
          • LOC102597873
          		 1143131 - 1144952 (-) 1-aminocyclopropane-1-carboxylate oxidase homolog
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            • XP_006352055.1
            • LOC102594577
            		 1151674 - 1154415 (-) 1-aminocyclopropane-1-carboxylate oxidase homolog
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              • XP_006351986.1
              • LOC102597559_rename1
              		 1160101 - 1163264 (-) UDP-arabinose 4-epimerase 1-like isoform X3
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                • XP_015166228.1
                • LOC102597559
                		 1160101 - 1165342 (-) probable UDP-arabinose 4-epimerase 2 isoform X2
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                  • XP_006351985.1
                  • LOC102597559_rename2
                  		 1165318 - 1167364 (-) serine/threonine-protein phosphatase 7 long form homolog isoform X1
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                    • XP_006351984.1
                    • LOC102596910
                    		 1170431 - 1176786 (-) protein PAT1 homolog 1
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                      • XP_006352056.1
                      • LOC102594899
                      		 1181064 - 1184269 (-) UDP-glycosyltransferase 82A1
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                        • XP_006351983.1
                        • LOC102596570
                        		 1192308 - 1193180 (+) uncharacterized protein LOC102596570
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                          • XP_006351982.1
                          • LOC102596238
                          		 1193595 - 1198541 (-) gamma aminobutyrate transaminase 3, chloroplastic
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                            • XP_006351981.1
                            • LOC102595896
                            		 1210551 - 1217912 (-) beta-amyrin 11-oxidase-like
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                              • XP_006351980.1
                              • LOC102595558
                              		 1284621 - 1294604 (+) gamma aminobutyrate transaminase 2
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                                • XP_006351979.1
                                • LOC102595233
                                		 1302613 - 1342043 (-) nuclear pore complex protein NUP205
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                                  • XP_006351978.1
                                  • LOC102594898
                                  		 1343562 - 1348189 (-) beta-glucuronosyltransferase GlcAT14B-like
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                                    • XP_006351977.1
                                    • LOC102594576
                                    		 1355462 - 1356514 (+) probable sugar phosphate/phosphate translocator At4g32390
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                                      • XP_006351976.1
                                      • LOC102594238
                                      		 1404902 - 1406590 (+) tyrosine decarboxylase 1-like
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                                        • XP_015166201.1
                                        • LOC107061455
                                        		 1426745 - 1427446 (+) uncharacterized protein LOC107061455
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                                          • XP_006352057.1
                                          • LOC102595559
                                          		 1427471 - 1428369 (+) uncharacterized protein LOC102595559
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                                            Biosynthesis information
                                            Annotation changelog

                                            Entry version: next

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            2024-08-12
                                            MIBiG v4 annotathon
                                            • (ID: 7S2S3KC6XWEGKGTSIW66GBJX)
                                            • (ID: RQC4INAEW544B5HWWLI3CX2V)
                                            • (ID: 4CEPXXFDQQ46VQJXBT4B4AUO)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)

                                            Entry version: 1

                                            Date
                                            Changes
                                            Submitters
                                            Reviewers
                                            2022-09-15
                                            Entry added
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            • (ID: AAAAAAAAAAAAAAAAAAAAAAAA)
                                            Similar known gene clusters from MIBiG 4.0
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                                            Modifications to original record
                                            • renamed CDS with name LOC102598519 at join{[1123007:1123050](+), [1123198:1123311](+), [1124051:1124150](+), [1124243:1124300](+), [1124374:1124533](+), [1124666:1124751](+), [1125509:1125600](+), [1126233:1126398](+), [1126468:1126591](+), [1127113:1127189](+), [1127333:1127481](+), [1127578:1128672](+), [1128815:1129006](+), [1129620:1129828](+)} to LOC102598519_rename1 to avoid duplicates
                                            • renamed CDS with name LOC102597559 at join{[1163138:1163264](-), [1162711:1162825](-), [1162506:1162614](-), [1162161:1162253](-), [1161680:1161822](-), [1161355:1161450](-), [1160932:1161062](-), [1160399:1160544](-), [1160100:1160318](-)} to LOC102597559_rename1 to avoid duplicates
                                            • renamed CDS with name LOC102597559 at join{[1166572:1167364](-), [1166307:1166484](-), [1165760:1166198](-), [1165317:1165668](-)} to LOC102597559_rename2 to avoid duplicates
                                            • removed an exact duplicate of CDS feature LOC102597559
                                            • removed an exact duplicate of CDS feature LOC102597559