BGC0002722 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0002722 (Solanum tuberosum (potato))

Region	Type	From	To	Similarity Confidence	Most similar known cluster
Region 1	terpene	1	349,009	High	α-chaconine/α-solanine	other:other+terpene+saccharide

BGC0002722 - Region 1 - terpene

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Location: 1 - 349,009 nt. (total: 349,009 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (PT_phytoene_like or phytoene_synt or Lycopene_cycl or Lycopene_cycl_fung or T1TS or T1TS_KS or T2TS or TS_UbiA or TS_Pyr4)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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Gene overview

MIBiG

Tailoring

MIBiG comparison

KnownClusterBlast

Terpene

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

External annotation

Name		MIBiG
Version		4.0alpha

Type		Subregion
Location		1 - 349,010
Label		BGC0002722

Tailoring functions

Oxidoreductases: oxygenase

LOC102595896: cytochrome P450

smcogs: SMCOG1034: cytochrome P450

Transferases: aminotransferase

LOC102595558: aminotransferase class-III

smcogs: SMCOG1013: aminotransferase class-III

LOC102596238: aminotransferase class-III

smcogs: SMCOG1013: aminotransferase class-III

Lyases: decarboxylase dehydratase

LOC102594238: Decarboxylase, pyridoxal-dependent

smcogs: SMCOG1180: Decarboxylase, pyridoxal-dependent

LOC102597559: NAD-dependent epimerase/dehydratase

smcogs: SMCOG1010: NAD-dependent epimerase/dehydratase

LOC102597559_rename1: NAD-dependent epimerase/dehydratase

smcogs: SMCOG1010: NAD-dependent epimerase/dehydratase

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001248.3	0.78	terpene	clavaric acid	Hypholoma sublateritium
BGC0000670.4	0.49	terpene	thalianol, thaliandiol, thalianin	Arabidopsis thaliana
BGC0001317.3	0.41	terpene	lupeol	Lotus japonicus
BGC0000669.3	0.39	terpene	marneral	Arabidopsis thaliana
BGC0002402.2	0.39	terpene	Yossoside I, Yossoside II, Yossoside III, Yossoside IV, Yossoside V	Spinacia oleracea
BGC0002722.2	0.35	other (other), saccharide, terpene	α-chaconine, α-solanine	Solanum tuberosum
BGC0001313.3	0.32	terpene	arabidiol-baruol	Arabidopsis thaliana
BGC0001314.3	0.31	terpene	tirucalla	Arabidopsis thaliana
BGC0000686.3	0.27	terpene	helvolic acid	Aspergillus fumigatus Af293

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002722.2	0.98	other (other), saccharide, terpene	α-chaconine, α-solanine	Solanum tuberosum
BGC0001248.3	0.78	terpene	clavaric acid	Hypholoma sublateritium
BGC0000670.4	0.57	terpene	thalianol, thaliandiol, thalianin	Arabidopsis thaliana
BGC0000669.3	0.52	terpene	marneral	Arabidopsis thaliana
BGC0001317.3	0.50	terpene	lupeol	Lotus japonicus
BGC0002402.2	0.50	terpene	Yossoside I, Yossoside II, Yossoside III, Yossoside IV, Yossoside V	Spinacia oleracea
BGC0001997.3	0.48	terpene	capsidiol	Nicotiana tabacum
BGC0000852.5	0.48	other (other)	ectoine	Sporosarcina pasteurii
BGC0001314.3	0.47	terpene	tirucalla	Arabidopsis thaliana
BGC0000786.3	0.46	saccharide	O-antigen	Edwardsiella ictaluri 93-146

Similar known clusters from MIBiG 4.0

Detailed terpene predictions

Product predictions:

Class	Subclass	Product name	Chain length	Initial cyclisations	Functional groups
triterpene	steroid		C30	steroid skeleton	OH

Genes with terpene domains:

LOC102593690: T2TS

Domain 1 (106 - 767): Type 2 terpene synthase

Subtype: Oxidosqualene substrate

Reactions:: 2,3-oxidosqualene → steroid

LOC102593367: T2TS

Domain 1 (89 - 692): Type 2 terpene synthase

Subtype: Oxidosqualene substrate

Reactions:: 2,3-oxidosqualene → steroid

Terpene

Glossary

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