BGC0001379 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001379 (Streptomyces luteocolor)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS-like	1	33,575	streptothricin	NRP	62%

BGC0001379 - Region 1 - NRPS-like

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Location: 1 - 33,575 nt. (total: 33,575 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 33,576
Label		BGC0001379

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001379.1	0.95	NRP	BD-12	Streptomyces luteocolor
BGC0000375.1	0.32	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.31	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001458.1	0.28	Other, , (, A, m, i, n, o, c, o, u, m, a, r, i, n, )	salinipostin G	Salinispora tropica CNB-440
BGC0000348.1	0.28	NRP	ergovaline	Epichloe festucae var. lolii
BGC0000900.1	0.27	Other	ferrichrome	Aspergillus oryzae
BGC0001249.1	0.27	NRP	dimethylcoprogen	Alternaria alternata
BGC0001399.1	0.27	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000876.1	0.25	Other	neopolyoxin C	Streptomyces tendae
BGC0001561.1	0.25	NRP	curacomycin	Streptomyces curacoi

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001379.1	1.00	NRP	BD-12	Streptomyces luteocolor
BGC0000375.1	0.65	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.64	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001458.1	0.62	Other, , (, A, m, i, n, o, c, o, u, m, a, r, i, n, )	salinipostin G	Salinispora tropica CNB-440
BGC0000348.1	0.61	NRP	ergovaline	Epichloe festucae var. lolii
BGC0000900.1	0.61	Other	ferrichrome	Aspergillus oryzae
BGC0001249.1	0.61	NRP	dimethylcoprogen	Alternaria alternata
BGC0001399.1	0.60	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001561.1	0.60	NRP	curacomycin	Streptomyces curacoi
BGC0000876.1	0.59	Other	neopolyoxin C	Streptomyces tendae

Similar known gene clusters

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 4171 - 33575:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

BAU50944.1

Search NORINE for peptide: strict or relaxed

AMP-binding (17..417): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DveeLGVVtK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)