BGC0000114 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000114 (Streptomyces violaceusniger)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	T1PKS	1	95,700	monensin	Polyketide	44%

BGC0000114 - Region 1 - T1PKS

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Location: 1 - 95,700 nt. (total: 95,700 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 95,701
Label		BGC0000114

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000114.1	0.89	Polyketide	nigericin	Streptomyces violaceusniger
BGC0000041.1	0.32	Polyketide	oronofacic acid	Pseudomonas syringae
BGC0001273.1	0.31	Polyketide	asperlactone	Aspergillus ochraceus
BGC0001276.1	0.31	Polyketide	6-methylsalicyclic acid	Aspergillus terreus
BGC0001275.1	0.30	Polyketide	6-methylsalicyclic acid	Glarea lozoyensis
BGC0001244.1	0.30	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001266.1	0.30	Polyketide	grayanic acid	Cladonia grayi
BGC0001304.1	0.29	Polyketide	aflavarin	Aspergillus flavus NRRL3357
BGC0000353.1	0.29	NRP	tacrolimus	Streptomyces sp. MA6548
BGC0000170.1	0.29	Polyketide	yanuthone D	Aspergillus niger ATCC 1015

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000114.1	0.96	Polyketide	nigericin	Streptomyces violaceusniger
BGC0000041.1	0.65	Polyketide	oronofacic acid	Pseudomonas syringae
BGC0001273.1	0.64	Polyketide	asperlactone	Aspergillus ochraceus
BGC0001276.1	0.64	Polyketide	6-methylsalicyclic acid	Aspergillus terreus
BGC0001275.1	0.64	Polyketide	6-methylsalicyclic acid	Glarea lozoyensis
BGC0001244.1	0.64	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001266.1	0.63	Polyketide	grayanic acid	Cladonia grayi
BGC0001304.1	0.63	Polyketide	aflavarin	Aspergillus flavus NRRL3357
BGC0000353.1	0.63	NRP	tacrolimus	Streptomyces sp. MA6548
BGC0000170.1	0.62	Polyketide	yanuthone D	Aspergillus niger ATCC 1015

Similar known gene clusters

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 95700:

Rough prediction of core scaffold based on assumed PKS linker matching; tailoring reactions not taken into account

Polymer prediction:: (mal - Me-mal) + (Me-redmal) + (ccmal - Me-redmal) + (Me-ccmal - Me-redmal) + (Me-ohmal) + (Me-ccmal) + (Me-redmal) + (ohmal - ohmal - ohmal) + (Me-ccmal - redmal)
Non-colinear ordering:: ABC84456.1 + ABC84457.1 + ABC84458.1 + ABC84460.1 + ABC84461.1 + ABC84469.1 + ABC84470.1 + ABC84471.1 + ABC84459.1

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ABC84456.1

PKS_AT (541..848): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 83.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 207.5
inactive: 92.1
Methoxymalonyl-CoA: 72.7
Methylmalonyl-CoA: 63.0
Isobutyryl-CoA: 42.1
Ethylmalonyl-CoA: 28.9
Acetyl-CoA: 28.7
Propionyl-CoA: 27.0
Benzoyl-CoA: 26.8
CHC-CoA: 17.7
fatty_acid: 13.3
3-Methylbutyryl-CoA: 13.2
2-Methylbutyryl-CoA: 9.8
trans-1,2-CPDA: -0.3

PKS_AT (1577..1880): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 87.5%; Ethylmalonyl-CoA: 83.3%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 197.9
Ethylmalonyl-CoA: 191.3
Methoxymalonyl-CoA: 167.0
trans-1,2-CPDA: 129.9
2-Methylbutyryl-CoA: 126.0
Propionyl-CoA: 111.3
Malonyl-CoA: 94.3
CHC-CoA: 92.5
Isobutyryl-CoA: 70.3
fatty_acid: 44.8
Benzoyl-CoA: 44.8
Acetyl-CoA: 31.2
3-Methylbutyryl-CoA: 24.8
inactive: 16.9

ABC84457.1

PKS_AT (566..869): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 210.7
Ethylmalonyl-CoA: 206.8
Methoxymalonyl-CoA: 174.4
trans-1,2-CPDA: 135.7
2-Methylbutyryl-CoA: 131.2
Propionyl-CoA: 111.4
Malonyl-CoA: 110.8
CHC-CoA: 108.4
Isobutyryl-CoA: 73.3
Benzoyl-CoA: 68.8
fatty_acid: 48.0
Acetyl-CoA: 46.1
3-Methylbutyryl-CoA: 36.4
inactive: 20.9

ABC84458.1

PKS_AT (596..895): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 83.3%; Propionyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 225.2
inactive: 119.9
Methoxymalonyl-CoA: 55.2
Methylmalonyl-CoA: 44.0
Propionyl-CoA: 29.1
Isobutyryl-CoA: 27.1
Acetyl-CoA: 22.8
Benzoyl-CoA: 16.3
Ethylmalonyl-CoA: 10.5
2-Methylbutyryl-CoA: 8.5
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

PKS_AT (2398..2701): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 213.4
Ethylmalonyl-CoA: 206.9
Methoxymalonyl-CoA: 177.5
trans-1,2-CPDA: 149.4
2-Methylbutyryl-CoA: 140.3
Propionyl-CoA: 121.6
Malonyl-CoA: 109.7
CHC-CoA: 97.6
Isobutyryl-CoA: 70.9
Benzoyl-CoA: 58.5
Acetyl-CoA: 56.3
fatty_acid: 53.3
3-Methylbutyryl-CoA: 32.4
inactive: 24.8

ABC84459.1

PKS_AT (565..865): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 211.2
Ethylmalonyl-CoA: 208.1
Methoxymalonyl-CoA: 175.4
trans-1,2-CPDA: 138.3
2-Methylbutyryl-CoA: 133.7
Propionyl-CoA: 115.1
CHC-CoA: 114.0
Malonyl-CoA: 108.2
Isobutyryl-CoA: 66.7
Benzoyl-CoA: 65.0
Acetyl-CoA: 51.0
fatty_acid: 50.3
3-Methylbutyryl-CoA: 37.5
inactive: 27.0

PKS_AT (2364..2656): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 179.2
inactive: 95.5
Methylmalonyl-CoA: 63.2
Methoxymalonyl-CoA: 61.2
fatty_acid: 37.2
Isobutyryl-CoA: 36.3
Propionyl-CoA: 34.5
2-Methylbutyryl-CoA: 26.8
Acetyl-CoA: 22.9
Ethylmalonyl-CoA: 21.0
trans-1,2-CPDA: 14.3
CHC-CoA: 14.2
Benzoyl-CoA: 7.9
3-Methylbutyryl-CoA: 0.0

ABC84460.1

PKS_AT (565..865): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 211.2
Ethylmalonyl-CoA: 203.6
Methoxymalonyl-CoA: 174.4
trans-1,2-CPDA: 141.4
2-Methylbutyryl-CoA: 133.5
Propionyl-CoA: 108.5
Malonyl-CoA: 106.5
CHC-CoA: 102.7
Isobutyryl-CoA: 72.8
Benzoyl-CoA: 68.6
fatty_acid: 43.0
3-Methylbutyryl-CoA: 41.7
Acetyl-CoA: 40.8
inactive: 21.9

PKS_AT (2374..2677): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 210.9
Ethylmalonyl-CoA: 206.5
Methoxymalonyl-CoA: 173.7
trans-1,2-CPDA: 145.1
2-Methylbutyryl-CoA: 127.4
Propionyl-CoA: 110.3
Malonyl-CoA: 108.4
CHC-CoA: 94.3
Isobutyryl-CoA: 70.2
Benzoyl-CoA: 57.4
Acetyl-CoA: 42.6
fatty_acid: 40.0
3-Methylbutyryl-CoA: 23.9
inactive: 21.9

ABC84461.1

PKS_AT (588..888): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 205.5
Ethylmalonyl-CoA: 203.6
Methoxymalonyl-CoA: 174.7
2-Methylbutyryl-CoA: 127.4
trans-1,2-CPDA: 123.2
Propionyl-CoA: 106.5
Malonyl-CoA: 103.0
CHC-CoA: 90.4
Isobutyryl-CoA: 64.7
Benzoyl-CoA: 46.8
Acetyl-CoA: 40.1
fatty_acid: 37.5
3-Methylbutyryl-CoA: 22.4
inactive: 21.3

ABC84469.1

PKS_AT (576..876): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 205.7
Ethylmalonyl-CoA: 196.7
Methoxymalonyl-CoA: 170.3
2-Methylbutyryl-CoA: 149.3
trans-1,2-CPDA: 127.3
Propionyl-CoA: 122.1
Malonyl-CoA: 97.7
CHC-CoA: 97.0
Isobutyryl-CoA: 70.9
fatty_acid: 51.6
Acetyl-CoA: 47.4
Benzoyl-CoA: 46.3
3-Methylbutyryl-CoA: 40.5
inactive: 17.1

ABC84470.1

PKS_AT (578..878): mmal

ATSignature: Methylmalonyl-CoA

Top 3 matches:: Methylmalonyl-CoA: 100.0%; Methoxymalonyl-CoA: 95.8%; Ethylmalonyl-CoA: 91.7%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 204.4
Ethylmalonyl-CoA: 192.1
Methoxymalonyl-CoA: 170.7
2-Methylbutyryl-CoA: 146.8
trans-1,2-CPDA: 123.3
Propionyl-CoA: 120.8
Malonyl-CoA: 102.2
CHC-CoA: 89.4
Isobutyryl-CoA: 71.1
fatty_acid: 52.5
Benzoyl-CoA: 48.7
Acetyl-CoA: 43.6
3-Methylbutyryl-CoA: 36.6
inactive: 17.2

ABC84471.1

PKS_AT (577..876): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 167.2
inactive: 76.0
Methoxymalonyl-CoA: 62.5
Methylmalonyl-CoA: 53.7
fatty_acid: 31.2
Propionyl-CoA: 28.4
Isobutyryl-CoA: 23.7
2-Methylbutyryl-CoA: 21.1
Ethylmalonyl-CoA: 21.0
Acetyl-CoA: 20.9
trans-1,2-CPDA: 11.3
Benzoyl-CoA: 9.2
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

PKS_AT (2145..2448): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 168.4
inactive: 72.2
Methoxymalonyl-CoA: 62.8
Methylmalonyl-CoA: 51.6
Propionyl-CoA: 31.7
fatty_acid: 31.3
Isobutyryl-CoA: 22.2
Ethylmalonyl-CoA: 17.2
2-Methylbutyryl-CoA: 15.9
Acetyl-CoA: 15.1
trans-1,2-CPDA: 9.6
Benzoyl-CoA: 9.2
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

PKS_AT (3696..3989): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 164.3
inactive: 71.5
Methoxymalonyl-CoA: 60.7
Methylmalonyl-CoA: 50.9
fatty_acid: 31.8
Propionyl-CoA: 29.6
Ethylmalonyl-CoA: 20.6
Isobutyryl-CoA: 18.8
Acetyl-CoA: 17.6
2-Methylbutyryl-CoA: 14.2
trans-1,2-CPDA: 9.2
Benzoyl-CoA: 9.1
CHC-CoA: 0.0
3-Methylbutyryl-CoA: 0.0