Search NORINE for peptide: strict or relaxed

AMP-binding (14..386): N-(1,1-dimethyl-1-allyl)Trp

NRPSPredictor2: N-(1,1-dimethyl-1-allyl)Trp

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVWTHGGVAK

Nearest Stachelhaus code:

N-(1,1-dimethyl-1-allyl)Trp

Stachelhaus code match:

100% (strong)

AMP-binding (1040..1434): glu

NRPSPredictor2: glu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

glu

Stachelhaus prediction details:

Stachelhaus sequence:

DALhsGAVaK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

70% (weak)

AMP-binding (2465..2856): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

ile

Stachelhaus prediction details:

Stachelhaus sequence:

DVFfVGLVaK

Nearest Stachelhaus code:

d-lyserg

Stachelhaus code match:

80% (moderate)

AMP-binding (3514..3882): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

phe, trp

Single AA prediction:

phe

Stachelhaus prediction details:

Stachelhaus sequence:

DAWTVAAVCK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

100% (strong)

AMP-binding (4530..4902): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DALFvGLVaK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

80% (moderate)

AMP-binding (5556..5928): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

leu

Stachelhaus prediction details:

Stachelhaus sequence:

DAlLIGAVvK

Nearest Stachelhaus code:

val

Stachelhaus code match:

80% (moderate)

AMP-binding (6934..7332): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DaMVLgvVAK

Nearest Stachelhaus code:

ala

Stachelhaus code match:

70% (weak)