CAL_domain (44..471): pk

minowa: NH2

Prediction, score:

NH2: 121.8

fatty_acid: 22.9

Acetyl-CoA: 11.7

shikimic_acid: 0.0

AHBA: 0.0

Search NORINE for peptide: strict or relaxed

AMP-binding (463..848): trp

NRPSPredictor2: trp

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

tyr, bht

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVSSIGAVEK

Nearest Stachelhaus code:

trp

Stachelhaus code match:

100% (strong)

AMP-binding (1503..1907): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKLGDVNK

Nearest Stachelhaus code:

asn

Stachelhaus code match:

100% (strong)

AMP-binding (3082..3484): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asn

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKLGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (4148..4554): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWSVGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (5222..5616): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGVIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (461..867): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DtwDmGyVDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

60% (weak)

AMP-binding (1532..1937): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asn

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKLGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (2596..2987): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

ala

Stachelhaus prediction details:

Stachelhaus sequence:

DvvSaAfVYK

Nearest Stachelhaus code:

val

Stachelhaus code match:

60% (weak)

AMP-binding (4123..4528): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asn

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKLGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (5195..5590): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQVGmIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

90% (moderate)

AMP-binding (6250..6648): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHISLVDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (465..863): X

NRPSPredictor2: asp, asn

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DlGKTGVinK

Nearest Stachelhaus code:

3-me-glu

Stachelhaus code match:

70% (weak)

AMP-binding (1536..1935): X

NRPSPredictor2: phe, trp

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

phe, trp

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWTttGVgK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

70% (weak)