BGC0000871 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0000871 (Myxococcus xanthus DK 1622)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS-like	1	8,807

BGC0000871 - Region 1 - NRPS-like

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Location: 1 - 8,807 nt. (total: 8,807 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 8,808
Label		BGC0000871

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000871.1	0.67	Other, , (, N, u, c, l, e, o, s, i, d, e, )	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001831.1	0.17	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001758.1	0.17	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.17	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001641.1	0.17	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001833.1	0.17	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001137.1	0.15	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0000805.1	0.14	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0000899.1	0.14	Other	desosamine	Streptomyces narbonensis
BGC0000898.1	0.14	Saccharide	desosamine	Streptomyces venezuelae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000871.1	0.87	Other, , (, N, u, c, l, e, o, s, i, d, e, )	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001831.1	0.48	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001758.1	0.48	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.48	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001641.1	0.48	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001833.1	0.48	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001137.1	0.45	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0000805.1	0.44	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0000899.1	0.43	Other	desosamine	Streptomyces narbonensis
BGC0000898.1	0.43	Saccharide	desosamine	Streptomyces venezuelae

Similar known gene clusters

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 8807:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

MXAN_1528

Search NORINE for peptide: strict or relaxed

AMP-binding (568..998): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: efAVVGgpVK
Nearest Stachelhaus code:: trp
Stachelhaus code match:: 60% (weak)