BGC0001345 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001345 (Stigmatella aurantiaca Sg a15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	19,653	paenibactin	NRP	66%

BGC0001345 - Region 1 - NRPS

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Location: 1 - 19,653 nt. (total: 19,653 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 19,654
Label		BGC0001345

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001345.1	0.96	NRP	myxochelin A, myxochelin B	Stigmatella aurantiaca Sg a15
BGC0001185.1	0.35	NRP	bacillibactin	Bacillus velezensis FZB42
BGC0001399.1	0.31	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000401.1	0.29	NRP	paenibactin	Paenibacillus elgii B69
BGC0001574.1	0.28	NRP	diisonitrile antibiotic SF2768	Streptomyces thioluteus
BGC0001724.1	0.26	NRP, Polyketide	oxaleimide C	Penicillium oxalicum 114-2
BGC0001627.1	0.23	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0001844.1	0.22	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001758.1	0.22	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001458.1	0.22	Other, , (, A, m, i, n, o, c, o, u, m, a, r, i, n, )	salinipostin G	Salinispora tropica CNB-440

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001345.1	0.99	NRP	myxochelin A, myxochelin B	Stigmatella aurantiaca Sg a15
BGC0001185.1	0.68	NRP	bacillibactin	Bacillus velezensis FZB42
BGC0001399.1	0.64	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000401.1	0.63	NRP	paenibactin	Paenibacillus elgii B69
BGC0001574.1	0.62	NRP	diisonitrile antibiotic SF2768	Streptomyces thioluteus
BGC0001724.1	0.59	NRP, Polyketide	oxaleimide C	Penicillium oxalicum 114-2
BGC0001627.1	0.56	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0001844.1	0.56	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001758.1	0.55	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001458.1	0.55	Other, , (, A, m, i, n, o, c, o, u, m, a, r, i, n, )	salinipostin G	Salinispora tropica CNB-440

Similar known gene clusters

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19653:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

mxcE

Search NORINE for peptide: strict or relaxed

AMP-binding (42..446): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: dhb, sal
Small clusters prediction:: dhb, sal
Single AA prediction:: dhb

Stachelhaus prediction details:

Stachelhaus sequence:: PLPAQGVVNK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 100% (strong)

mxcG

Search NORINE for peptide: strict or relaxed

AMP-binding (466..870): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeDIGtVvK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)