Search NORINE for peptide: strict or relaxed

AMP-binding (471..886): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWSVGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (1560..1958): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAmlVgAaCK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

60% (weak)

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AMP-binding (31..441): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

N/A

Small clusters prediction:

dhb, sal

Single AA prediction:

pip

Stachelhaus prediction details:

Stachelhaus sequence:

twPSQGVLcK

Nearest Stachelhaus code:

pip

Stachelhaus code match:

70% (weak)

Search NORINE for peptide: strict or relaxed

AMP-binding (465..857): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGLIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

AMP-binding (1929..2324): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAmlwGGVyK

Nearest Stachelhaus code:

glu

Stachelhaus code match:

60% (weak)

AMP-binding (3395..3804): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

ala

Stachelhaus prediction details:

Stachelhaus sequence:

DvFsLaVVYK

Nearest Stachelhaus code:

ile

Stachelhaus code match:

70% (weak)

AMP-binding (4463..4871): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DpFLWGiLcK

Nearest Stachelhaus code:

phg

Stachelhaus code match:

70% (weak)

Search NORINE for peptide: strict or relaxed

AMP-binding (473..882): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

pro, pip

Small clusters prediction:

pro

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DpLYvalVVK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

60% (weak)

Search NORINE for peptide: strict or relaxed

AMP-binding (3832..4237): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGVIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (966..1366): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHLSLIDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

PKS_AT (5..289): mal

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 83.3%

inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 89.3

Methoxymalonyl-CoA: 30.3

inactive: 25.6

Methylmalonyl-CoA: 19.8

Isobutyryl-CoA: 11.3

trans-1,2-CPDA: 8.6

fatty_acid: 0.0

Propionyl-CoA: 0.0

Ethylmalonyl-CoA: 0.0

CHC-CoA: 0.0

Benzoyl-CoA: 0.0

Acetyl-CoA: 0.0

3-Methylbutyryl-CoA: 0.0

2-Methylbutyryl-CoA: 0.0

Search NORINE for peptide: strict or relaxed

AMP-binding (291..698): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

cys

Small clusters prediction:

cys

Single AA prediction:

cys

Stachelhaus prediction details:

Stachelhaus sequence:

DLYNLSaIWK

Nearest Stachelhaus code:

cys

Stachelhaus code match:

90% (moderate)