BGC0001168 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001168 (Streptomyces lividans 1326)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS-like	1	4,582

BGC0001168 - Region 1 - NRPS-like

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Location: 1 - 4,582 nt. (total: 4,582 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 4,583
Label		BGC0001168

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001168.1	1.00	NRP	livipeptin	Streptomyces lividans 1326
BGC0001900.1	0.32	NRP	fragin	Burkholderia cenocepacia H111
BGC0001516.1	0.22	NRP	aspergillic acid	Aspergillus flavus NRRL3357
BGC0001599.1	0.22	NRP	fragin	Burkholderia cenocepacia H111
BGC0001641.1	0.19	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.18	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001758.1	0.18	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001132.1	0.18	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001833.1	0.18	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001479.1	0.18	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001168.1	1.00	NRP	livipeptin	Streptomyces lividans 1326
BGC0001900.1	0.66	NRP	fragin	Burkholderia cenocepacia H111
BGC0001516.1	0.55	NRP	aspergillic acid	Aspergillus flavus NRRL3357
BGC0001599.1	0.55	NRP	fragin	Burkholderia cenocepacia H111
BGC0001641.1	0.51	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.50	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001758.1	0.50	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001132.1	0.50	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001833.1	0.50	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001479.1	0.50	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102

Similar known gene clusters

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 4582:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

SLI_0883

Search NORINE for peptide: strict or relaxed

AMP-binding (3..391): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DteDiGAItK
Nearest Stachelhaus code:: arg
Stachelhaus code match:: 60% (weak)