PKS_AT (559..855): pk

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 95.8%

CE-Malonyl-CoA: 58.3%

Methoxymalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 109.4

Isobutyryl-CoA: 97.2

Malonyl-CoA: 90.5

Methoxymalonyl-CoA: 88.6

Ethylmalonyl-CoA: 72.9

Propionyl-CoA: 47.7

trans-1,2-CPDA: 44.1

Benzoyl-CoA: 41.8

CHC-CoA: 37.8

Acetyl-CoA: 36.8

2-Methylbutyryl-CoA: 31.0

fatty_acid: 20.3

inactive: 18.2

3-Methylbutyryl-CoA: 11.1

Search NORINE for peptide: strict or relaxed

AMP-binding (510..914): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (2009..2399): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

ala

Stachelhaus prediction details:

Stachelhaus sequence:

DvwcTAAViK

Nearest Stachelhaus code:

val

Stachelhaus code match:

60% (weak)

Search NORINE for peptide: strict or relaxed

AMP-binding (467..859): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

leu

Stachelhaus prediction details:

Stachelhaus sequence:

DAWFLGNVVK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

100% (strong)

AMP-binding (1948..2338): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVWvlAAIiK

Nearest Stachelhaus code:

ala

Stachelhaus code match:

70% (weak)

AMP-binding (2991..3382): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWQcGLIDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

90% (moderate)