BGC0001641 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001641 (Photorhabdus laumondii subsp. laumondii TTO1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	49,537	rhizomide A / rhizomide B / rhizomide C	NRP	100%

BGC0001641 - Region 1 - NRPS

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Location: 1 - 49,537 nt. (total: 49,537 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 49,538
Label		BGC0001641

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001641.1	1.00	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.43	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001758.1	0.40	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001844.1	0.39	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001220.1	0.31	NRP	aculeacin A	Aspergillus japonicus
BGC0001131.1	0.31	NRP	ambactin	Xenorhabdus miraniensis
BGC0000307.1	0.26	NRP	AbT1	Aureobasidium pullulans
BGC0000334.1	0.26	NRP	cyclosporine	Tolypocladium inflatum NRRL8044
BGC0000393.1	0.25	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0002071.1	0.23	NRP	Virginiafactin	Pseudomonas sp. QS1027

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001641.1	1.00	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.74	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001758.1	0.72	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001844.1	0.71	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001220.1	0.65	NRP	aculeacin A	Aspergillus japonicus
BGC0001131.1	0.65	NRP	ambactin	Xenorhabdus miraniensis
BGC0000307.1	0.59	NRP	AbT1	Aureobasidium pullulans
BGC0000334.1	0.59	NRP	cyclosporine	Tolypocladium inflatum NRRL8044
BGC0000393.1	0.59	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0002071.1	0.56	NRP	Virginiafactin	Pseudomonas sp. QS1027

Similar known gene clusters

Module view

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 49537:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (phe - ala - phe - val - X - phe - val - thr - val - phe - val - thr - phe - val - val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

PLU_RS13235

Search NORINE for peptide: strict or relaxed

AMP-binding (611..1006): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A