BGC0001826 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

BGC0001826 (Xenorhabdus sp. KJ12.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	NRPS	1	17,375	taxlllaid A	NRP	4%

BGC0001826 - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 17,375 nt. (total: 17,375 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

External annotation

Name		MIBiG
Version		3.0

Type		Subregion
Location		1 - 17,376
Label		BGC0001826

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001826.1	0.94	NRP	xeneprotides A-C	Xenorhabdus sp. KJ12.1
BGC0001825.1	0.37	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000426.1	0.34	NRP	sevadicin	Paenibacillus larvae
BGC0000457.1	0.29	NRP	vicibactin	Rhizobium etli CFN 42
BGC0001050.1	0.28	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000389.1	0.28	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0001132.1	0.28	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0002071.1	0.28	NRP	Virginiafactin	Pseudomonas sp. QS1027
BGC0000901.1	0.28	Other	ferrichrome	Aspergillus niger
BGC0001833.1	0.28	NRP	icosalide A, icosalide B	Burkholderia gladioli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001826.1	0.98	NRP	xeneprotides A-C	Xenorhabdus sp. KJ12.1
BGC0001825.1	0.69	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000426.1	0.67	NRP	sevadicin	Paenibacillus larvae
BGC0000457.1	0.62	NRP	vicibactin	Rhizobium etli CFN 42
BGC0001050.1	0.62	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000389.1	0.62	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0001132.1	0.62	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0002071.1	0.61	NRP	Virginiafactin	Pseudomonas sp. QS1027
BGC0000901.1	0.61	Other	ferrichrome	Aspergillus niger
BGC0001833.1	0.61	NRP	icosalide A, icosalide B	Burkholderia gladioli

Similar known gene clusters

Module view

Legend

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17375:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr) + (pro)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

Xekj_RS17945

Search NORINE for peptide: strict or relaxed

AMP-binding (466..888): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

Xekj_RS17955

Search NORINE for peptide: strict or relaxed

AMP-binding (548..959): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFIAHVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 100% (strong)