BGC0001036 - Region 1 - NRPS,T1PKS,amglyccycl,other
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
More detailed help is available here.
Download region SVG
Location: 1 - 73,445 nt. (total: 73,445 nt)
Show pHMM detection rules used
Region on contig edge.
NRPS: cds(Condensation and (AMP-binding or A-OX))
other: (LmbU or Neocarzinostat or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)
amglyccycl: ((DOIS or DHQ_synthase or ValA or salQ) or strH or strK1 or strK2 or NeoL or SpcFG or SpcDK_glyc)
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
other: (LmbU or Neocarzinostat or fom1 or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)
amglyccycl: ((DOIS or DHQ_synthase or ValA or salQ) or strH or strK1 or strK2 or NeoL or SpcFG or SpcDK_glyc)
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
Legend:
reset view
zoom to selection