Search NORINE for peptide: strict or relaxed

CAL_domain (47..490): pk

minowa: NH2

Prediction, score:

NH2: 200.6

fatty_acid: 20.4

AHBA: 18.4

shikimic_acid: 8.5

Acetyl-CoA: 0.4

AMP-binding (2796..3195): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHLSLIeK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

90% (moderate)

AMP-binding (3860..4254): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

leu

Stachelhaus prediction details:

Stachelhaus sequence:

DAWFLGhVVK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

90% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (469..885): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DvQcLseVtK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

50% (weak)

AMP-binding (1564..1963): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

cys

Small clusters prediction:

cys

Single AA prediction:

cys

Stachelhaus prediction details:

Stachelhaus sequence:

DLYNLSLIWK

Nearest Stachelhaus code:

cys

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (547..954): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (1618..2024): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

pro, pip

Small clusters prediction:

pro

Single AA prediction:

pro

Stachelhaus prediction details:

Stachelhaus sequence:

DIQYyAQVVK

Nearest Stachelhaus code:

pip

Stachelhaus code match:

90% (moderate)

AMP-binding (2690..3098): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (506..907): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

val

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWlGGTFK

Nearest Stachelhaus code:

val

Stachelhaus code match:

90% (moderate)