CAL_domain (47..470): pk

minowa: NH2

Prediction, score:

NH2: 92.8

fatty_acid: 19.2

shikimic_acid: 5.9

AHBA: 3.8

Acetyl-CoA: 3.7

Search NORINE for peptide: strict or relaxed

AMP-binding (462..856): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

N/A

Small clusters prediction:

tyr, bht

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVSnvGAVEK

Nearest Stachelhaus code:

trp

Stachelhaus code match:

80% (moderate)

AMP-binding (1518..1913): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKMGdVhK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

80% (moderate)

AMP-binding (3021..3419): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKvGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

90% (moderate)

AMP-binding (4081..4493): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (5166..5558): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGLIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (462..868): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DtwDmGyVDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

60% (weak)

AMP-binding (1536..1917): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKvGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

90% (moderate)

AMP-binding (2577..2978): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

N/A

Small clusters prediction:

gly, ala

Single AA prediction:

ala

Stachelhaus prediction details:

Stachelhaus sequence:

DvfSvAvVYK

Nearest Stachelhaus code:

val

Stachelhaus code match:

60% (weak)

AMP-binding (4118..4517): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKvGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

90% (moderate)

AMP-binding (5176..5575): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGVIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

AMP-binding (6234..6632): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

ala

Stachelhaus prediction details:

Stachelhaus sequence:

DVFSVaLVyK

Nearest Stachelhaus code:

d-lyserg

Stachelhaus code match:

80% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (470..874): X

NRPSPredictor2: asp, asn

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DlGKTGVvnK

Nearest Stachelhaus code:

3-me-glu

Stachelhaus code match:

70% (weak)

AMP-binding (1540..1937): X

NRPSPredictor2: phe, trp

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

phe, trp

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWTttGVaK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

70% (weak)