PKS_AT (559..855): pk

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 100.0%

CE-Malonyl-CoA: 62.5%

Methylmalonyl-CoA: 54.2%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 108.1

Isobutyryl-CoA: 97.1

Malonyl-CoA: 95.6

Methoxymalonyl-CoA: 87.8

Ethylmalonyl-CoA: 70.7

Propionyl-CoA: 48.6

trans-1,2-CPDA: 44.5

Benzoyl-CoA: 43.3

CHC-CoA: 38.7

Acetyl-CoA: 37.5

2-Methylbutyryl-CoA: 31.3

inactive: 20.9

fatty_acid: 20.6

3-Methylbutyryl-CoA: 11.1

Search NORINE for peptide: strict or relaxed

AMP-binding (510..914): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (2009..2399): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVWCtAAIiK

Nearest Stachelhaus code:

ala

Stachelhaus code match:

80% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (469..859): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

leu

Stachelhaus prediction details:

Stachelhaus sequence:

DAWFLGNVVK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

100% (strong)

AMP-binding (1508..1903): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

gaQFIAqVaK

Nearest Stachelhaus code:

pro

Stachelhaus code match:

60% (weak)

AMP-binding (2553..2943): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVWvlAAIiK

Nearest Stachelhaus code:

ala

Stachelhaus code match:

70% (weak)

AMP-binding (3596..3987): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAWQcGLIDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

90% (moderate)