PKS_AT (16..277): mal

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 66.7%

inactive: 54.2%

Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 105.7

Methylmalonyl-CoA: 57.8

Methoxymalonyl-CoA: 55.5

inactive: 39.6

Propionyl-CoA: 27.8

trans-1,2-CPDA: 19.3

fatty_acid: 16.6

2-Methylbutyryl-CoA: 16.5

CHC-CoA: 15.8

Ethylmalonyl-CoA: 14.2

Isobutyryl-CoA: 11.4

Benzoyl-CoA: 9.8

Acetyl-CoA: 8.2

3-Methylbutyryl-CoA: 0.0

Search NORINE for peptide: strict or relaxed

AMP-binding (460..861): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGLIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

AMP-binding (1533..1930): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

N/A

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAlLIGAVaK

Nearest Stachelhaus code:

val

Stachelhaus code match:

80% (moderate)

AMP-binding (3074..3472): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

tyr, bht

Single AA prediction:

tyr

Stachelhaus prediction details:

Stachelhaus sequence:

DASTVAAVCK

Nearest Stachelhaus code:

tyr

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (463..861): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

phe, trp

Single AA prediction:

phe

Stachelhaus prediction details:

Stachelhaus sequence:

DAWTVAAVCK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

100% (strong)

AMP-binding (1522..1934): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

pro, pip

Small clusters prediction:

pro

Single AA prediction:

pro

Stachelhaus prediction details:

Stachelhaus sequence:

DVQYaAHVVK

Nearest Stachelhaus code:

pro

Stachelhaus code match:

90% (moderate)

AMP-binding (2599..3005): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

val

Stachelhaus prediction details:

Stachelhaus sequence:

DAYWWGGTFK

Nearest Stachelhaus code:

val

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (502..920): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (1582..1990): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHISLVDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

AMP-binding (2659..3056): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVAmVGAvcK

Nearest Stachelhaus code:

arg

Stachelhaus code match:

70% (weak)

AMP-binding (3761..4171): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asn

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKVGEVGK

Nearest Stachelhaus code:

asn

Stachelhaus code match:

100% (strong)