Search NORINE for peptide: strict or relaxed

CAL_domain (54..489): pk

minowa: NH2

Prediction, score:

NH2: 165.0

fatty_acid: 9.6

Acetyl-CoA: 2.7

shikimic_acid: 0.0

AHBA: 0.0

AMP-binding (1149..1548): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asp

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKVGHVGK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (2649..3053): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHISLIDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

AMP-binding (4569..4968): asp

NRPSPredictor2: asp

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asp

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKVGHVGK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (5667..6076): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (7203..7602): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHISLIDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

AMP-binding (8268..8676): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DGevVGGvtK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

60% (weak)