Search NORINE for peptide: strict or relaxed

AMP-binding (209..614): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DiWQstadDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

50% (weak)

CAL_domain (42..467): pk

minowa: NH2

Prediction, score:

NH2: 25.7

AHBA: 22.8

fatty_acid: 18.5

shikimic_acid: 12.9

Acetyl-CoA: 4.0

Search NORINE for peptide: strict or relaxed

AMP-binding (456..841): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asp

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKMGvVnK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

80% (moderate)

AMP-binding (2041..2425): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

val

Stachelhaus prediction details:

Stachelhaus sequence:

DAYWWGGTFK

Nearest Stachelhaus code:

val

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (457..852): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DtwDmGyVDK

Nearest Stachelhaus code:

gln

Stachelhaus code match:

60% (weak)

AMP-binding (1515..1885): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKvGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

90% (moderate)

AMP-binding (2548..2918): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKvGAVNK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

90% (moderate)

AMP-binding (3578..3961): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGLVWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

AMP-binding (4612..4998): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asp

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKMGvVnK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

80% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (441..818): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

val

Stachelhaus prediction details:

Stachelhaus sequence:

DAFWlGGTFK

Nearest Stachelhaus code:

val

Stachelhaus code match:

90% (moderate)

AMP-binding (1466..1839): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

pro, pip

Small clusters prediction:

pro

Single AA prediction:

pro

Stachelhaus prediction details:

Stachelhaus sequence:

DvQYvGHaIK

Nearest Stachelhaus code:

pip

Stachelhaus code match:

70% (weak)