Search NORINE for peptide: strict or relaxed

AMP-binding (523..932): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (1620..2018): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

glu, gln

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DvWNIGliHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

70% (weak)

AMP-binding (2706..3103): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHLSLIDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

AMP-binding (3797..4202): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

glu, gln

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DgEdhgAVtK

Nearest Stachelhaus code:

val

Stachelhaus code match:

50% (weak)

AMP-binding (5312..5711): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DGeAVggVtK

Nearest Stachelhaus code:

trp

Stachelhaus code match:

60% (weak)

Search NORINE for peptide: strict or relaxed

AMP-binding (544..942): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

asp, asn, glu, gln, aad

Small clusters prediction:

asp, asn

Single AA prediction:

asp

Stachelhaus prediction details:

Stachelhaus sequence:

DLTKVGHVGK

Nearest Stachelhaus code:

asp

Stachelhaus code match:

100% (strong)

AMP-binding (1617..2022): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

thr

Single AA prediction:

thr

Stachelhaus prediction details:

Stachelhaus sequence:

DFWNIGMVHK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

100% (strong)

AMP-binding (2703..3107): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGLIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

PKS_AT (553..842): mal

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 62.5%

Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 139.8

Methoxymalonyl-CoA: 74.8

inactive: 72.0

Methylmalonyl-CoA: 65.1

Ethylmalonyl-CoA: 47.6

Propionyl-CoA: 40.9

Isobutyryl-CoA: 32.5

Acetyl-CoA: 26.4

fatty_acid: 22.7

Benzoyl-CoA: 21.3

CHC-CoA: 19.8

2-Methylbutyryl-CoA: 18.5

trans-1,2-CPDA: 12.5

3-Methylbutyryl-CoA: 0.0

Search NORINE for peptide: strict or relaxed

CAL_domain (50..491): pk

minowa: NH2

Prediction, score:

NH2: 161.7

fatty_acid: 35.4

shikimic_acid: 11.9

AHBA: 3.1

Acetyl-CoA: -4.2

AMP-binding (1170..1570): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DiWHiSLIEK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

80% (moderate)